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Phase D Round 1A v1 — arXiv Baseline Scan

掃描時間：2026-06-10 08:29

arXiv 候選數：1000 篇（日期：2023-06-01 → 2026-06-10）

Top N：100

Profile：llm-graphrag-goat

⚠️ MVP 注意事項

這是 v1 MVP，只用語意相似度（cosine on nomic-embed）排序。

尚未做（v2/v3 才加）：

  • ❌ Stage 4 規則加權（venue tier、citation、recency）
  • ❌ Stage 5 Claude Haiku 評分（R / Q / S 三維度）
  • ❌ Stage 6 Claude Sonnet 深度分析（引用建議、差異化論述）
  • ❌ Stage 7 VPN 下載清單（IEEE/Springer 等付費期刊）

高 similarity ≠ 必然相關（embedding 可能誤判）。請當作 初步初步篩選，後續會由 Claude 評分修正。

Top 100 候選論文

1. HELP: HyperNode Expansion and Logical Path-Guided Evidence Localization for Accurate and Efficient GraphRAG

Large Language Models (LLMs) often struggle with inherent knowledge boundaries and hallucinations, limiting their reliability in knowledge-intensive tasks. While Retrieval-Augmented Generation (RAG) mitigates these issues, it frequently overlooks structural interdependencies essential for multi-hop reasoning. Graph-based RAG approaches attempt to bridge this gap, yet they typically face trade-offs between accuracy and efficiency due to challenges such as costly graph traversals and semantic nois...

2. OMD-GraphRAG: Enhancing GraphRAG with Ontology-Guided Extraction, Multi-Dimensional Clustering and Dual-Channel Fusion

Retrieval-Augmented Generation (RAG) systems face significant challenges in complex reasoning, multi-hop queries, and domain-specific QA. While existing GraphRAG frameworks have made progress in structural knowledge organization, they still have limitations in knowledge extraction precision, community report integrity, and retrieval performance. This paper proposes OMD-GraphRAG, an enhanced framework built upon open-source GraphRAG. The framework introduces three core innovations: (1) Ontology-G...

3. Graph-Augmented Reasoning with Large Language Models for Tobacco Pest and Disease Management

This paper proposes a graph-augmented reasoning framework for tobacco pest and disease management that integrates structured domain knowledge into large language models. Building on GraphRAG, we construct a domain-specific knowledge graph and retrieve query-relevant subgraphs to provide relational evidence during answer generation. The framework adopts ChatGLM as the Transformer backbone with LoRA-based parameter-efficient fine-tuning, and employs a graph neural network to learn node representat...

4. Do We Still Need GraphRAG? Benchmarking RAG and GraphRAG for Agentic Search Systems

Retrieval-augmented generation (RAG) and its graph-based extensions (GraphRAG) are effective paradigms for improving large language model (LLM) reasoning by grounding generation in external knowledge. However, most existing RAG and GraphRAG systems operate under static or one-shot retrieval, where a fixed set of documents is provided to the LLM in a single pass. In contrast, recent agentic search systems enable dynamic, multi-round retrieval and sequential decision-making during inference, and h...

5. WildGraphBench: Benchmarking GraphRAG with Wild-Source Corpora

Graph-based Retrieval-Augmented Generation (GraphRAG) organizes external knowledge as a hierarchical graph, enabling efficient retrieval and aggregation of scattered evidence across multiple documents. However, many existing benchmarks for GraphRAG rely on short, curated passages as external knowledge, failing to adequately evaluate systems in realistic settings involving long contexts and large-scale heterogeneous documents. To bridge this gap, we introduce WildGraphBench, a benchmark designed ...

6. Knowledge Reasoning of Large Language Models Integrating Graph-Structured Information for Pest and Disease Control in Tobacco

This paper proposes a large language model (LLM) approach that integrates graph-structured information for knowledge reasoning in tobacco pest and disease control. Built upon the GraphRAG framework, the proposed method enhances knowledge retrieval and reasoning by explicitly incorporating structured information from a domain-specific knowledge graph. Specifically, LLMs are first leveraged to assist in the construction of a tobacco pest and disease knowledge graph, which organizes key entities su...

7. Beyond Chunk-Local Extraction: Cross-Chunk Graph Augmentation for GraphRAG

GraphRAG extends retrieval-augmented generation by organizing corpora as explicit knowledge graphs, enabling graph-based retrieval for complex question answering. However, existing frameworks extract entities and relations within individual chunks, leaving cross-chunk relations -- those whose evidence spans multiple passages -- systematically absent from the index. Exhaustive LLM-based recovery of such relations is impractical due to the combinatorial explosion of chunk combinations. We present ...

8. RLM-on-KG: Heuristics First, LLMs When Needed: Adaptive Retrieval Control over Mention Graphs for Scattered Evidence

When does an LLM controller outperform rule-based traversal for knowledge graph exploration? We study this question through RLM-on-KG, a retrieval system that treats an LLM as an autonomous navigator over an RDF-encoded mention graph for grounded question answering. Unlike GraphRAG pipelines that rely on offline LLM indexing, RLM-on-KG performs entity-first, multi-hop exploration at query time using deterministic graph construction and a fixed tool set. Our central finding is a conditional advan...

9. STAR: Semantic-Tuned and Tail-Adaptive Retriever for Graph-Augmented Generation

To augment Large Language Models (LLMs) for multi-hop question answering, a mainstream solution within Graph Retrieval Augmented Generation (GraphRAG) leverages lightweight retrievers to efficiently extract information from a given Knowledge Graph (KG). However, existing methods often overlook the inherent challenge of sparse semantic information in graphs. Specifically, our experiments reveal that these methods produce biased retrieval Semantic Shortcut Bias and Long-Tail Path Bias, leading to ...

10. GraphRAG on Consumer Hardware: Benchmarking Local LLMs for Healthcare EHR Schema Retrieval

Graph-based Retrieval Augmented Generation (GraphRAG) extends retrieval-augmented generation to support structured reasoning over complex corpora, but its reliability under resource-constrained, privacy-sensitive deployments remains unclear. In healthcare, where Electronic Health Record (EHR) data is complex and strictly regulated, reliance on cloud-based large language models (LLMs) introduces challenges in cost, latency, and compliance. In this work, we present a systematic evaluation of Graph...

11. Democratizing GraphRAG: Linear, CPU-Only Graph Retrieval for Multi-Hop QA

GraphRAG systems improve multi-hop retrieval by modeling structure, but many approaches rely on expensive LLM-based graph construction and GPU-heavy inference. We present SPRIG (Seeded Propagation for Retrieval In Graphs), a CPU-only, linear-time, token-free GraphRAG pipeline that replaces LLM graph building with lightweight NER-driven co-occurrence graphs and uses Personalized PageRank (PPR) for 28% with negligible Recall@10 changes. The results characterize when CPU-friendly graph retrieval he...

12. Suppressing Domain-Specific Hallucination in Construction LLMs: A Knowledge Graph Foundation for GraphRAG and QLoRA on River and Sediment Control Technical Standards

This paper addresses the challenge of answering technical questions derived from Japan's River and Sediment Control Technical Standards -- a multi-volume regulatory document covering survey, planning, design, and maintenance of river levees, dams, and sabo structures -- using open-source large language models running entirely on local hardware. We implement and evaluate three complementary approaches: Case A (plain 20B LLM baseline), Case B (8B LLM with QLoRA domain fine-tuning on 715 graph-deri...

13. LiteSemRAG: Lightweight LLM-Free Semantic-Aware Graph Retrieval for Robust RAG

Graph-based Retrieval-Augmented Generation (RAG) has shown great potential for improving multi-level reasoning and structured evidence aggregation. However, existing graph-based RAG frameworks heavily rely on exploiting large language models (LLMs) during indexing and querying, leading to high token consumption, computational cost and latency overhead. In this paper, we propose LiteSemRAG, a lightweight, fully LLM-free, semantic-aware graph retrieval framework. LiteSemRAG constructs a heterogene...

14. Use Graph When It Needs: Efficiently and Adaptively Integrating Retrieval-Augmented Generation with Graphs

Large language models (LLMs) often struggle with knowledge-intensive tasks due to hallucinations and outdated parametric knowledge. While Retrieval-Augmented Generation (RAG) addresses this by integrating external corpora, its effectiveness is limited by fragmented information in unstructured domain documents. Graph-augmented RAG (GraphRAG) emerged to enhance contextual reasoning through structured knowledge graphs, yet paradoxically underperforms vanilla RAG in real-world scenarios, exhibiting ...

15. EHRAG: Bridging Semantic Gaps in Lightweight GraphRAG via Hybrid Hypergraph Construction and Retrieval

Graph-based Retrieval-Augmented Generation (GraphRAG) enhances LLMs by structuring corpus into graphs to facilitate multi-hop reasoning. While recent lightweight approaches reduce indexing costs by leveraging Named Entity Recognition (NER), they rely strictly on structural co-occurrence, failing to capture latent semantic connections between disjoint entities. To address this, we propose EHRAG, a lightweight RAG framework that constructs a hypergraph capturing both structure and semantic level r...

In this paper, we present KG20C and KG20C-QA, two curated datasets for advancing question answering (QA) research on scholarly data. KG20C is a high-quality scholarly knowledge graph constructed from the Microsoft Academic Graph through targeted selection of venues, quality-based filtering, and schema definition. Although KG20C has been available online in non-peer-reviewed sources such as GitHub repository, this paper provides the first formal, peer-reviewed description of the dataset, includin...

17. GraphRAG for Engineering Diagrams: ChatP&ID Enables LLM Interaction with P&IDs

Large Language Models (LLMs) combined with Retrieval-Augmented Generation (RAG) and knowledge graphs offer new opportunities for interacting with engineering diagrams such as Piping and Instrumentation Diagrams (P&IDs). However, directly processing raw images or smart P&ID files with LLMs is often costly, inefficient, and prone to hallucinations. This work introduces ChatP&ID, an agentic framework that enables grounded and cost-effective natural-language interaction with P&IDs using Graph Retrie...

18. Leveraging Spreading Activation for Improved Document Retrieval in Knowledge-Graph-Based RAG Systems

Despite initial successes and a variety of architectures, retrieval-augmented generation systems still struggle to reliably retrieve and connect the multi-step evidence required for complicated reasoning tasks. Most of the standard RAG frameworks regard all retrieved information as equally reliable, overlooking the varying credibility and interconnected nature of large textual corpora. GraphRAG approaches offer potential improvement to RAG systems by integrating knowledge graphs, which structure...

19. Domain-Specific Knowledge Graphs in RAG-Enhanced Healthcare LLMs

Large Language Models (LLMs) generate fluent answers but can struggle with trustworthy, domain-specific reasoning. We evaluate whether domain knowledge graphs (KGs) improve Retrieval-Augmented Generation (RAG) for healthcare by constructing three PubMed-derived graphs: $\mathbb{G}_1$ (T2DM), $\mathbb{G}_2$ (Alzheimer's disease), and $\mathbb{G}_3$ (AD+T2DM). We design two probes: Probe 1 targets merged AD T2DM knowledge, while Probe 2 targets the intersection of $\mathbb{G}_1$ and $\mathbb{G}_2$...

20. Toward Robust GraphRAG: Mitigating Retrieval Drift and Hallucination from Imperfect Knowledge Graphs

Graph Retrieval-Augmented Generation (GraphRAG) has become a common approach for multi-hop reasoning by using knowledge graphs (KGs) as structured retrieval indexes. However, most existing GraphRAG methods implicitly assume that LLM-constructed KGs provide structural support for evidence chaining. In this paper, we show that this assumption does not always hold in practice through an empirical analysis, and identify two recurring KG issue modes often overlooked by current retrievers: spurious no...

21. LogosKG: Hardware-Optimized Scalable and Interpretable Knowledge Graph Retrieval

Knowledge graphs (KGs) are increasingly integrated with large language models (LLMs) to provide structured, verifiable reasoning. A core operation in this integration is multi-hop retrieval, yet existing systems struggle to balance efficiency, scalability, and interpretability. We introduce LogosKG, a novel, hardware-aligned framework that enables scalable and interpretable k-hop retrieval on large KGs by building on symbolic KG formulations and executing traversal as hardware-efficient operatio...

22. CE-GOCD: Central Entity-Guided Graph Optimization for Community Detection to Augment LLM Scientific Question Answering

Large Language Models (LLMs) are increasingly used for question answering over scientific research papers. Existing retrieval augmentation methods often rely on isolated text chunks or concepts, but overlook deeper semantic connections between papers. This impairs the LLM's comprehension of scientific literature, hindering the comprehensiveness and specificity of its responses. To address this, we propose Central Entity-Guided Graph Optimization for Community Detection (CE-GOCD), a method that a...

23. BubbleRAG: Evidence-Driven Retrieval-Augmented Generation for Black-Box Knowledge Graphs

Large Language Models (LLMs) exhibit hallucinations in knowledge-intensive tasks. Graph-based retrieval augmented generation (RAG) has emerged as a promising solution, yet existing approaches suffer from fundamental recall and precision limitations when operating over black-box knowledge graphs -- graphs whose schema and structure are unknown in advance. We identify three core challenges that cause recall loss (semantic instantiation uncertainty and structural path uncertainty) and precision los...

24. GraphRAG-Router: Learning Cost-Efficient Routing over GraphRAGs and LLMs with Reinforcement Learning

Graph-based retrieval-augmented generation (GraphRAG) has recently emerged as a powerful paradigm for knowledge-intensive question answering, especially for tasks that require structured evidence organization and multi-hop reasoning. However, existing GraphRAG systems are typically built in a one-size-fits-all manner, relying on a fixed retrieval framework and a single, often large and costly, generator LLM for all queries. This static design limits their ability to adapt to the complexity of va...

25. KGiRAG: An Iterative GraphRAG Approach for Responding Sensemaking Queries

Recent literature highlights the potential of graph-based approaches within large language model (LLM) retrieval-augmented generation (RAG) pipelines for answering queries of varying complexity, particularly those that fall outside the LLM's prior knowledge. However, LLMs are prone to hallucination and often face technical limitations in handling contexts large enough to ground complex queries effectively. To address these challenges, we propose a novel iterative, feedback-driven GraphRAG archit...

26. Injecting Structured Biomedical Knowledge into Language Models: Continual Pretraining vs. GraphRAG

The injection of domain-specific knowledge is crucial for adapting language models (LMs) to specialized fields such as biomedicine. While most current approaches rely on unstructured text corpora, this study explores two complementary strategies for leveraging structured knowledge from the UMLS Metathesaurus: (i) Continual pretraining that embeds knowledge into model parameters, and (ii) Graph Retrieval-Augmented Generation (GraphRAG) that consults a knowledge graph at inference time. We first c...

27. A Human-in-the-Loop, LLM-Centered Architecture for Knowledge-Graph Question Answering

Large Language Models (LLMs) excel at language understanding but remain limited in knowledge-intensive domains due to hallucinations, outdated information, and limited explainability. Text-based retrieval-augmented generation (RAG) helps ground model outputs in external sources but struggles with multi-hop reasoning. Knowledge Graphs (KGs), in contrast, support precise, explainable querying, yet require a knowledge of query languages. This work introduces an interactive framework in which LLMs g...

28. XGRAG: A Graph-Native Framework for Explaining KG-based Retrieval-Augmented Generation

Graph-based Retrieval-Augmented Generation (GraphRAG) extends traditional RAG by using knowledge graphs (KGs) to give large language models (LLMs) a structured, semantically coherent context, yielding more grounded answers. However, GraphRAG reasoning process remains a black-box, limiting our ability to understand how specific pieces of structured knowledge influence the final output. Existing explainability (XAI) methods for RAG systems, designed for text-based retrieval, are limited to interpr...

29. N2N-GQA: Noise-to-Narrative for Graph-Based Table-Text Question Answering Using LLMs

Multi-hop question answering over hybrid table-text data requires retrieving and reasoning across multiple evidence pieces from large corpora, but standard Retrieval-Augmented Generation (RAG) pipelines process documents as flat ranked lists, causing retrieval noise to obscure reasoning chains. We introduce N2N-GQA. To our knowledge, it is the first zeroshot framework for open-domain hybrid table-text QA that constructs dynamic evidence graphs from noisy retrieval outputs. Our key insight is tha...

30. SCOUT-RAG: Scalable and Cost-Efficient Unifying Traversal for Agentic Graph-RAG over Distributed Domains

Graph-RAG improves LLM reasoning using structured knowledge, yet conventional designs rely on a centralized knowledge graph. In distributed and access-restricted settings (e.g., hospitals or multinational organizations), retrieval must select relevant domains and appropriate traversal depth without global graph visibility or exhaustive querying. To address this challenge, we introduce \textbf{SCOUT-RAG} (\textit{\underline{S}calable and \underline{CO}st-efficient \underline{U}nifying \underline{...

31. RFKG-CoT: Relation-Driven Adaptive Hop-count Selection and Few-Shot Path Guidance for Knowledge-Aware QA

Large language models (LLMs) often generate hallucinations in knowledge-intensive QA due to parametric knowledge limitations. While existing methods like KG-CoT improve reliability by integrating knowledge graph (KG) paths, they suffer from rigid hop-count selection (solely question-driven) and underutilization of reasoning paths (lack of guidance). To address this, we propose RFKG-CoT: First, it replaces the rigid hop-count selector with a relation-driven adaptive hop-count selector that dynami...

32. Ex-GraphRAG: Interpretable Evidence Routing for Graph-Augmented LLMs

GraphRAG conditions language models on subgraphs retrieved from knowledge graphs, encoded via message-passing GNNs. Because these encoders entangle node contributions through iterated neighborhood aggregation, there is no closed-form way to determine how much each retrieved entity influenced the encoder's output, and therefore no way to faithfully audit what structural evidence actually reached the model. We introduce Ex-GraphRAG, which replaces the GNN encoder with a Multivariate Graph Neural A...

33. From Flat to Structural: Enhancing Automated Short Answer Grading with GraphRAG

Automated short answer grading (ASAG) is critical for scaling educational assessment, yet large language models (LLMs) often struggle with hallucinations and strict rubric adherence due to their reliance on generalized pre-training. While Rretrieval-Augmented Generation (RAG) mitigates these issues, standard "flat" vector retrieval mechanisms treat knowledge as isolated fragments, failing to capture the structural relationships and multi-hop reasoning essential for complex educational content. T...

34. A phenotype-driven and evidence-governed framework for knowledge graph enrichment and hypotheses discovery in population data

Current knowledge graph (KG) construction methods are confirmatory, focusing on recovering known relationships rather than identifying novel or context-dependent nodes. This paper proposes a phenotype-driven and evidence-governed framework that shifts the paradigm toward structured hypothesis discovery and controlled KG expansion. The approach integrates graph neural networks (GNNs) for phenotype discovery, causal inference, probabilistic reasoning and large language models (LLMs) for hypothesis...

35. SAGE: Structure Aware Graph Expansion for Retrieval of Heterogeneous Data

Retrieval-augmented question answering over heterogeneous corpora requires connected evidence across text, tables, and graph nodes. While entity-level knowledge graphs support structured access, they are costly to construct and maintain, and inefficient to traverse at query time. In contrast, standard retriever-reader pipelines use flat similarity search over independently chunked text, missing multi-hop evidence chains across modalities. We propose SAGE (Structure Aware Graph Expansion) framewo...

36. Core-based Hierarchies for Efficient GraphRAG

Retrieval-Augmented Generation (RAG) enhances large language models by incorporating external knowledge. However, existing vector-based methods often fail on global sensemaking tasks that require reasoning across many documents. GraphRAG addresses this by organizing documents into a knowledge graph with hierarchical communities that can be recursively summarized. Current GraphRAG approaches rely on Leiden clustering for community detection, but we prove that on sparse knowledge graphs, where ave...

37. How Much Reasoning Do Retrieval-Augmented Models Add beyond LLMs? A Benchmarking Framework for Multi-Hop Inference over Hybrid Knowledge

Large language models (LLMs) continue to struggle with knowledge-intensive questions that require up-to-date information and multi-hop reasoning. Augmenting LLMs with hybrid external knowledge, such as unstructured text and structured knowledge graphs, offers a promising alternative to costly continual pretraining. As such, reliable evaluation of their retrieval and reasoning capabilities becomes critical. However, many existing benchmarks increasingly overlap with LLM pretraining data, which me...

38. ContextRAG: Extraction-Free Hierarchical Graph Construction for Retrieval-Augmented Generation

Graph-structured retrieval-augmented generation (RAG) systems can improve answer quality on multi-hop questions, but many current systems rely on large language models (LLMs) to extract entities, relations, and summaries during indexing. These calls add token and wall-clock costs that grow with corpus size. We present ContextRAG, a graph RAG system whose graph topology is constructed without LLM-based entity or relation extraction. ContextRAG derives a fuzzy concept graph over chunk embeddings u...

39. RPO-RAG: Aligning Small LLMs with Relation-aware Preference Optimization for Knowledge Graph Question Answering

Large Language Models (LLMs) have recently demonstrated remarkable reasoning abilities, yet hallucinate on knowledge-intensive tasks. Retrieval-augmented generation (RAG) mitigates this issue by grounding answers in external sources, e.g., knowledge graphs (KGs). However, existing KG-based RAG approaches rely on semantics-unaware path sampling and are weakly aligned with KG reasoning objectives, which limits further accuracy gains. They also feed retrieved paths directly into the reasoner withou...

40. Agentic GraphRAG: Navigating Unstructured Financial Data with Collaborative AI

We present a collaborative agentic GraphRAG framework for expert analysis of commercial registry data. Public registries are often formally accessible, yet difficult to use in practice because they combine structured records with large volumes of unstructured legal text. This limits conventional keyword and vector-only retrieval, especially for multi-hop, temporal, and entity-centric investigations. Our approach builds a Neo4j knowledge graph through a three-phase pipeline: (i) deterministic ing...

41. Query-Efficient Agentic Graph Extraction Attacks on GraphRAG Systems

Graph-based retrieval-augmented generation (GraphRAG) systems construct knowledge graphs over document collections to support multi-hop reasoning. While prior work shows that GraphRAG responses may leak retrieved subgraphs, the feasibility of query-efficient reconstruction of the hidden graph structure remains unexplored under realistic query budgets. We study a budget-constrained black-box setting where an adversary adaptively queries the system to steal its latent entity-relation graph. We pro...

Graph-based Retrieval-Augmented Generation (GraphRAG) mitigates hallucinations in Large Language Models (LLMs) by grounding them in structured knowledge. However, current GraphRAG methods are constrained by a prevailing \textit{build-then-reason} paradigm, which relies on a static, pre-constructed Knowledge Graph (KG). This paradigm faces two critical challenges. First, the KG's inherent incompleteness often breaks reasoning paths. Second, the graph's low signal-to-noise ratio introduces distrac...

43. UltRAG: a Universal Simple Scalable Recipe for Knowledge Graph RAG

Large language models (LLMs) frequently generate confident yet factually incorrect content when used for language generation (a phenomenon often known as hallucination). Retrieval augmented generation (RAG) tries to reduce factual errors by identifying information in a knowledge corpus and putting it in the context window of the model. While this approach is well-established for document-structured data, it is non-trivial to adapt it for Knowledge Graphs (KGs), especially for queries that requir...

44. IndexRAG: Bridging Facts for Cross-Document Reasoning at Index Time

Multi-hop question answering (QA) requires reasoning across multiple documents, yet existing retrieval-augmented generation (RAG) approaches address this either through graph-based methods requiring additional online processing or iterative multi-step reasoning. We present IndexRAG, a novel approach that shifts cross-document reasoning from online inference to offline indexing. IndexRAG identifies bridge entities shared across documents and generates bridging facts as independently retrievable u...

45. Paper Circle: An Open-source Multi-agent Research Discovery and Analysis Framework

The rapid growth of scientific literature has made it increasingly difficult for researchers to efficiently discover, evaluate, and synthesize relevant work. Recent advances in multi-agent large language models (LLMs) have demonstrated strong potential for understanding user intent and are being trained to utilize various tools. In this paper, we introduce Paper Circle, a multi-agent research discovery and analysis system designed to reduce the effort required to find, assess, organize, and unde...

46. Codebase-Memory: Tree-Sitter-Based Knowledge Graphs for LLM Code Exploration via MCP

Large Language Model (LLM) coding agents typically explore codebases through repeated file-reading and grep-searching, consuming thousands of tokens per query without structural understanding. We present Codebase-Memory, an open-source system that constructs a persistent, Tree-Sitter-based knowledge graph via the Model Context Protocol (MCP), parsing 66 languages through a multi-phase pipeline with parallel worker pools, call-graph traversal, impact analysis, and community discovery. Evaluated a...

47. MemGraphRAG: Memory-based Multi-Agent System for Graph Retrieval-Augmented Generation

Retrieval-Augmented Generation (RAG) has become an essential method for mitigating hallucinations in Large Language Models (LLMs) by leveraging external knowledge. Although effective for simple queries, traditional RAG struggles with large-scale, unstructured corpora where information is highly fragmented. Graph-based RAG (GraphRAG) incorporates knowledge graphs to capture structural relationships, enabling more comprehensive retrieval for complex reasoning. However, existing GraphRAG methods re...

48. GraphER: An Efficient Graph-Based Enrichment and Reranking Method for Retrieval-Augmented Generation

Retrieval-augmented generation (RAG) systems that rely on semantic search often fail to retrieve the complete set of evidence for complex queries, particularly when information is distributed across multiple sources. Existing approaches either rely on iterative agentic retrieval, which can be inefficient, or maintain additional structures such as knowledge graphs, which introduce storage and maintenance overhead. In this paper, we propose GraphER, a graph-based enrichment and reranking framework...

49. P-RAG: Prompt-Enhanced Parametric RAG with LoRA and Selective CoT for Biomedical and Multi-Hop QA

Large Language Models (LLMs) demonstrate remarkable capabilities but remain limited by their reliance on static training data. Retrieval-Augmented Generation (RAG) addresses this constraint by retrieving external knowledge during inference, though it still depends heavily on knowledge base quality. To explore potential improvements, we evaluated three RAG variants-Standard RAG, DA-RAG, and our proposed Prompt-Enhanced Parametric RAG (P-RAG), a hybrid architecture that integrates parametric knowl...

50. ConRAG: Consensus-Driven Multi-View Retrieval for Multi-Hop Question Answering

Retrieval-augmented generation (RAG) has emerged as a promising paradigm for enhancing large language models (LLMs) on multi-hop question answering (QA), which requires reasoning over evidence from multiple documents. Current multi-hop RAG methods generally focus on either query-side task decomposition or corpus-side knowledge graph construction. Despite their progress, these methods still struggle to achieve satisfactory performance on complex multi-hop QA tasks. To this end, we propose ConRAG,...

51. Position: How can Graphs Help Large Language Models?

With the rapid advancement of large language models (LLMs), classic graph learning tasks have greatly benefited from LLMs, including improved encoding of textual features, more efficient construction of graphs from text, and enhanced reasoning over knowledge graphs. In this paper, we ask a complementary question: How can graphs help LLMs? We address this question from three perspectives: 1) graphs provide an up-to-date knowledge source that helps reduce LLM hallucinations, 2) graph-based prompti...

52. PersonalAI 2.0: Enhancing knowledge graph traversal/retrieval with planning mechanism for Personalized LLM Agents

We introduce PersonalAI 2.0 (PAI-2), a novel framework, designed to enhance large language model (LLM) based systems through integration of external knowledge graphs (KG). The proposed approach addresses key limitations of existing Graph Retrieval-Augmented Generation (GraphRAG) methods by incorporating a dynamic, multistage query processing pipeline. The central point of PAI-2 design is its ability to perform adaptive, iterative information search, guided by extracted entities, matched graph ve...

53. Darth Vecdor: An Open-Source System for Generating Knowledge Graphs Through Large Language Model Queries

Many large language models (LLMs) are trained on a massive body of knowledge present on the Internet. Darth Vecdor (DV) was designed to extract this knowledge into a structured, terminology-mapped, SQL database ("knowledge base" or "knowledge graph"). Knowledge graphs may be useful in many domains, including healthcare. Although one might query an LLM directly rather than a SQL-based knowledge graph, concerns such as cost, speed, safety, and confidence may arise, especially in high-volume operat...

54. SRAG: RAG with Structured Data Improves Vector Retrieval

Retrieval Augmented Generation (RAG) provides the necessary informational grounding to LLMs in the form of chunks retrieved from a vector database or through web search. RAG could also use knowledge graph triples as a means of providing factual information to an LLM. However, the retrieval is only based on representational similarity between a question and the contents. The performance of RAG depends on the numeric vector representations of the query and the chunks. To improve these representati...

55. StratRAG: A Multi-Hop Retrieval Evaluation Dataset for Retrieval-Augmented Generation Systems

We introduce StratRAG, an open-source retrieval evaluation dataset for benchmarking Retrieval-Augmented Generation (RAG) systems on multi-hop reasoning tasks under realistic, noisy document-pool conditions. Derived from HotpotQA (distractor setting), StratRAG comprises 2,200 examples across three question types -- bridge, comparison, and yes-no -- each paired with a pool of 15 candidate documents containing exactly 2 gold documents and 13 topically related distractors. We benchmark three retriev...

56. Pruning Minimal Reasoning Graphs for Efficient Retrieval-Augmented Generation

Retrieval-augmented generation (RAG) is now standard for knowledge-intensive LLM tasks, but most systems still treat every query as fresh, repeatedly re-retrieving long passages and re-reasoning from scratch, inflating tokens, latency, and cost. We present AutoPrunedRetriever, a graph-style RAG system that persists the minimal reasoning subgraph built for earlier questions and incrementally extends it for later ones. AutoPrunedRetriever stores entities and relations in a compact, ID-indexed code...

57. HyperRAG: Reasoning N-ary Facts over Hypergraphs for Retrieval Augmented Generation

Graph-based retrieval-augmented generation (RAG) methods, typically built on knowledge graphs (KGs) with binary relational facts, have shown promise in multi-hop open-domain QA. However, their rigid retrieval schemes and dense similarity search often introduce irrelevant context, increase computational overhead, and limit relational expressiveness. In contrast, n-ary hypergraphs encode higher-order relational facts that capture richer inter-entity dependencies and enable shallower, more efficien...

58. Open Biomedical Knowledge Graphs at Scale: Construction, Federation, and AI Agent Access with Samyama Graph Database

Biomedical knowledge is fragmented across siloed databases -- Reactome for pathways, STRING for protein interactions, ClinicalTrials.gov for study registries, DrugBank for drug vocabularies, DGIdb for drug-gene interactions, SIDER for side effects. We present three open-source biomedical knowledge graphs -- Pathways KG (118,686 nodes, 834,785 edges from 5 sources), Clinical Trials KG (7,774,446 nodes, 26,973,997 edges from 5 sources), and Drug Interactions KG (32,726 nodes, 191,970 edges from 3 ...

59. UniD$^3$: A Knowledge Graph-Enhanced RAG Framework for Drug-Disease Discovery and Reasoning

Systematic characterization of drug-disease relationships is essential for drug discovery and repurposing, yet is hindered by the heterogeneity and rapid growth of biomedical literature. Existing datasets rely on labor-intensive curation and are often incomplete, while LLM-only approaches suffer from hallucination and weak evidence grounding. We introduce UniD$^3$, a unified framework that integrates Large Language Models with Knowledge Graph-enhanced Retrieval-Augmented Generation (KG-RAG) to e...

60. Incorporating contextual information into KGWAS for interpretable GWAS discovery

Genome-Wide Association Studies (GWAS) identify associations between genetic variants and disease; however, moving beyond associations to causal mechanisms is critical for therapeutic target prioritization. The recently proposed Knowledge Graph GWAS (KGWAS) framework addresses this challenge by linking genetic variants to downstream gene-gene interactions via a knowledge graph (KG), thereby improving detection power and providing mechanistic insights. However, the original KGWAS implementation r...

61. Clinical Knowledge Graph Construction and Evaluation with Multi-LLMs via Retrieval-Augmented Generation

Large language models (LLMs) offer new opportunities for constructing knowledge graphs (KGs) from unstructured clinical narratives. However, existing approaches often rely on structured inputs and lack robust validation of factual accuracy and semantic consistency, limitations that are especially problematic in oncology. We introduce an end-to-end framework for clinical KG construction and evaluation directly from free text using multi-agent prompting and a schema-constrained Retrieval-Augmented...

62. Beyond Explicit Edges: Robust Reasoning over Noisy and Sparse Knowledge Graphs

GraphRAG is increasingly adopted for converting unstructured corpora into graph structures to enable multi-hop reasoning. However, standard graph algorithms rely heavily on static connectivity and explicit edges, often failing in real-world scenarios where knowledge graphs (KGs) are noisy, sparse, or incomplete. To address this limitation, we introduce INSES (Intelligent Navigation and Similarity Enhanced Search), a dynamic framework designed to reason beyond explicit edges. INSES couples LLM-gu...

63. TechGraphRAG: An Agentic Graph-Augmented RAG Framework for Technical Literature Reasoning

This paper presents an agentic retrieval-augmented generation (RAG) framework for domain-specific technical reasoning support, instantiated over a curated corpus of approximately 2,100 academic papers in intelligent tires, vehicle dynamics, and vehicle control. Unlike conventional single-pass RAG systems, the proposed architecture employs a 13-step autonomous pipeline that classifies queries by intent, scores evidence sufficiency against a multi-dimensional rubric, performs agentic retry with dr...

64. Deep GraphRAG: A Balanced Approach to Hierarchical Retrieval and Adaptive Integration

Graph-based Retrieval-Augmented Generation (GraphRAG) frameworks face a trade-off between the comprehensiveness of global search and the efficiency of local search. Existing methods are often challenged by navigating large-scale hierarchical graphs, optimizing retrieval paths, and balancing exploration-exploitation dynamics, frequently lacking robust multi-stage re-ranking. To overcome these deficits, we propose Deep GraphRAG, a framework designed for a balanced approach to hierarchical retrieva...

65. GAAMA: Graph Augmented Associative Memory for Agents

AI agents that interact with users across multiple sessions require persistent long-term memory to maintain coherent, personalized behavior. Current approaches either rely on flat retrieval-augmented generation (RAG), which loses structural relationships among memories, or use entity-centric knowledge graphs that suffer from mega-hub effects in conversational data, diluting graph-based relevance propagation. We propose GAAMA, a graph-augmented associative memory for agents that constructs a conc...

66. S-Path-RAG: Semantic-Aware Shortest-Path Retrieval Augmented Generation for Multi-Hop Knowledge Graph Question Answering

We present S-Path-RAG, a semantic-aware shortest-path Retrieval-Augmented Generation framework designed to improve multi-hop question answering over large knowledge graphs. S-Path-RAG departs from one-shot, text-heavy retrieval by enumerating bounded-length, semantically weighted candidate paths using a hybrid weighted $k$-shortest, beam, and constrained random-walk strategy, learning a differentiable path scorer together with a contrastive path encoder and lightweight verifier, and injecting a ...

67. TIEG-Youpu Solution for NeurIPS 2022 WikiKG90Mv2-LSC

WikiKG90Mv2 in NeurIPS 2022 is a large encyclopedic knowledge graph. Embedding knowledge graphs into continuous vector spaces is important for many practical applications, such as knowledge acquisition, question answering, and recommendation systems. Compared to existing knowledge graphs, WikiKG90Mv2 is a large scale knowledge graph, which is composed of more than 90 millions of entities. Both efficiency and accuracy should be considered when building graph embedding models for knowledge graph a...

68. The Reasoning Bottleneck in Graph-RAG: Structured Prompting and Context Compression for Multi-Hop QA

Graph-RAG systems achieve strong multi-hop question answering by indexing documents into knowledge graphs, but strong retrieval does not guarantee strong answers. Evaluating KET-RAG, a leading Graph-RAG system, on three multi-hop QA benchmarks (HotpotQA, MuSiQue, 2WikiMultiHopQA), we find that 77% to 91% of questions have the gold answer in the retrieved context, yet accuracy is only 35% to 78%, and 73% to 84% of errors are reasoning failures. We propose two augmentations: (i) SPARQL chain-of-th...

69. Enhancing Metacognitive AI: Knowledge-Graph Population with Graph-Theoretic LLM Enrichment

Metacognition-the ability to monitor one's own knowledge state, spot gaps, and autonomously fill them--remains largely absent from modern AI. Here, we present MetaKGEnrich, a fully automated pipeline that endows large language model (LLM) applications with self-directed knowledge repair. The system (i) builds knowledge graphs from a seed query, (ii) detects sparse regions via seven graph metrics, (iii) has GPT-4o generate targeted questions, (iv) retrieves web evidence with Tavily and ingests it...

70. LEC-KG: An LLM-Embedding Collaborative Framework for Domain-Specific Knowledge Graph Construction -- A Case Study on SDGs

Constructing domain-specific knowledge graphs from unstructured text remains challenging due to heterogeneous entity mentions, long-tail relation distributions, and the absence of standardized schemas. We present LEC-KG, a bidirectional collaborative framework that integrates the semantic understanding of Large Language Models (LLMs) with the structural reasoning of Knowledge Graph Embeddings (KGE). Our approach features three key components: (1) hierarchical coarse-to-fine relation extraction t...

71. GraphScout: Empowering Large Language Models with Intrinsic Exploration Ability for Agentic Graph Reasoning

Knowledge graphs provide structured and reliable information for many real-world applications, motivating increasing interest in combining large language models (LLMs) with graph-based retrieval to improve factual grounding. Recent Graph-based Retrieval-Augmented Generation (GraphRAG) methods therefore introduce iterative interaction between LLMs and knowledge graphs to enhance reasoning capability. However, existing approaches typically depend on manually designed guidance and interact with kno...

72. A2RAG: Adaptive Agentic Graph Retrieval for Cost-Aware and Reliable Reasoning

Graph Retrieval-Augmented Generation (Graph-RAG) enhances multihop question answering by organizing corpora into knowledge graphs and routing evidence through relational structure. However, practical deployments face two persistent bottlenecks: (i) mixed-difficulty workloads where one-size-fits-all retrieval either wastes cost on easy queries or fails on hard multihop cases, and (ii) extraction loss, where graph abstraction omits fine-grained qualifiers that remain only in source text. We presen...

73. Plasma GraphRAG: Physics-Grounded Parameter Selection for Gyrokinetic Simulations

Accurate parameter selection is fundamental to gyrokinetic plasma simulations, yet current practices rely heavily on manual literature reviews, leading to inefficiencies and inconsistencies. We introduce Plasma GraphRAG, a novel framework that integrates Graph Retrieval-Augmented Generation (GraphRAG) with large language models (LLMs) for automated, physics-grounded parameter range identification. By constructing a domain-specific knowledge graph from curated plasma literature and enabling struc...

74. BridgeRAG: Training-Free Bridge-Conditioned Retrieval for Multi-Hop Question Answering

Multi-hop retrieval is not a single-step relevance problem: later-hop evidence should be ranked by its utility conditioned on retrieved bridge evidence, not by similarity to the original query alone. We present BridgeRAG, a training-free, graph-free retrieval method for retrieval-augmented generation (RAG) over multi-hop questions that operationalizes this view with a tripartite scorer s(q,b,c) over (question, bridge, candidate). BridgeRAG separates coverage from scoring: dual-entity ANN expansi...

75. Frugal Knowledge Graph Construction with Local LLMs: A Zero-Shot Pipeline, Self-Consistency and Wisdom of Artificial Crowds

This paper presents an empirical study of a multi-model zero-shot pipeline for knowledge graph construction and exploitation, executed entirely through local inference on consumer-grade hardware. We propose a reproducible evaluation framework integrating two external benchmarks (DocRED, HotpotQA), WebQuestionsSP-style synthetic data, and the RAGAS evaluation framework in an automated pipeline. On 500 document-level relations, our system achieves an F1 of 0.70 $\pm$ 0.041 in zero-shot, compared t...

76. Towards Robust Retrieval-Augmented Generation Based on Knowledge Graph: A Comparative Analysis

Retrieval-Augmented Generation (RAG) was introduced to enhance the capabilities of Large Language Models (LLMs) beyond their encoded prior knowledge. This is achieved by providing LLMs with an external source of knowledge, which helps reduce factual hallucinations and enables access to new information not available during pretraining. However, inconsistent retrieved information can negatively affect LLM responses. The Retrieval-Augmented Generation Benchmark (RGB) was introduced to evaluate the ...

77. Mixture of Demonstrations for Textual Graph Understanding and Question Answering

Textual graph-based retrieval-augmented generation (GraphRAG) has emerged as a powerful paradigm for enhancing large language models (LLMs) in domain-specific question answering. While existing approaches primarily focus on zero-shot GraphRAG, selecting high-quality demonstrations is crucial for improving reasoning and answer accuracy. Furthermore, recent studies have shown that retrieved subgraphs often contain irrelevant information, which can degrade reasoning performance. In this paper, we p...

78. HyperGraphPro: Progress-Aware Reinforcement Learning for Structure-Guided Hypergraph RAG

Graph Retrieval-Augmented Generation (GraphRAG) has emerged as a promising paradigm that organizes external knowledge into structured graphs of entities and relations, enabling large language models (LLMs) to perform complex reasoning beyond text-chunk retrieval. Recent advances have integrated reinforcement learning (RL) into agentic GraphRAG approaches, enabling iterative interactions with knowledge graphs during training. However, existing RL-based methods suffer from two key limitations: (1)...

79. KEPo: Knowledge Evolution Poison on Graph-based Retrieval-Augmented Generation

Graph-based Retrieval-Augmented Generation (GraphRAG) constructs the Knowledge Graph (KG) from external databases to enhance the timeliness and accuracy of Large Language Model (LLM) generations. However, this reliance on external data introduces new attack surfaces. Attackers can inject poisoned texts into databases to manipulate LLMs into producing harmful target responses for attacker-chosen queries. Existing research primarily focuses on attacking conventional RAG systems. However, such meth...

80. KNIGHT: Knowledge Graph-Driven Multiple-Choice Question Generation with Adaptive Hardness Calibration

With the rise of large language models (LLMs), they have become instrumental in applications such as Retrieval-Augmented Generation (RAG). Yet evaluating these systems remains bottlenecked by the time and cost of building specialized assessment datasets. We introduce KNIGHT, an LLM-based, knowledge-graph-driven framework for generating multiple-choice question (MCQ) datasets from external sources. KNIGHT constructs a topic-specific knowledge graph, a structured and parsimonious summary of entiti...

81. GraphRAG-IRL: Personalized Recommendation with Graph-Grounded Inverse Reinforcement Learning and LLM Re-ranking

Personalized recommendation requires models that capture sequential user preferences while remaining robust to sparse feedback and semantic ambiguity. Recent work has explored large language models (LLMs) as recommenders and re-rankers, but pure prompt-based ranking often suffers from poor calibration, sensitivity to candidate ordering, and popularity bias. These limitations make LLMs useful semantic reasoners, but unreliable as standalone ranking engines. We present \textbf{GraphRAG-IRL}, a h...

82. TCM-DiffRAG: Personalized Syndrome Differentiation Reasoning Method for Traditional Chinese Medicine based on Knowledge Graph and Chain of Thought

Background: Retrieval augmented generation (RAG) technology can empower large language models (LLMs) to generate more accurate, professional, and timely responses without fine tuning. However, due to the complex reasoning processes and substantial individual differences involved in traditional Chinese medicine (TCM) clinical diagnosis and treatment, traditional RAG methods often exhibit poor performance in this domain. Objective: To address the limitations of conventional RAG approaches in TCM a...

83. AtomicRAG: Atom-Entity Graphs for Retrieval-Augmented Generation

Recent GraphRAG methods integrate graph structures into text indexing and retrieval, using knowledge graph triples to connect text chunks, thereby improving retrieval coverage and precision. However, we observe that treating text chunks as the basic unit of knowledge representation rigidly groups multiple atomic facts together, limiting the flexibility and adaptability needed to support diverse retrieval scenarios. Additionally, triple-based entity linking is sensitive to relation-extraction err...

84. Retrieving Minimal and Sufficient Reasoning Subgraphs with Graph Foundation Models for Path-aware GraphRAG

Graph-based retrieval-augmented generation (GraphRAG) exploits structured knowledge to support knowledge-intensive reasoning. However, most existing methods treat graphs as intermediate artifacts, and the few subgraph-based retrieval methods depend on heuristic rules coupled with domain-specific distributions. They fail in typical cold-start scenarios where data in target domains is scarce, thus yielding reasoning contexts that are either informationally incomplete or structurally redundant. In ...

85. Large Language Models Meet Biomedical Knowledge Graphs for Mechanistically Grounded Therapeutic Prioritization

Drug repurposing is often framed as a candidate identification task, but existing approaches provide limited guidance for distinguishing biologically plausible candidates from historically well-connected ones. Here we introduce DrugKLM, a hybrid framework that integrates biomedical knowledge graph structure with large language model-based mechanistic reasoning to enable mechanistically grounded therapeutic prioritization. Across benchmark datasets, DrugKLM outperforms knowledge graph-only and la...

86. Overview of the MedHopQA track at BioCreative IX: track description, participation and evaluation of systems for multi-hop medical question answering

Multi-hop question answering (QA) remains a significant challenge in the biomedical domain, requiring systems to integrate information across multiple sources to answer complex questions. To address this problem, the BioCreative IX MedHopQA shared task was designed to benchmark in multi-hop reasoning for large language models (LLMs). We developed a novel dataset of 1,000 challenging QA pairs spanning diseases, genes, and chemicals, with particular emphasis on rare diseases. Each question was con...

87. PrimeKG-CL: A Continual Graph Learning Benchmark on Evolving Biomedical Knowledge Graphs

Biomedical knowledge graphs underwrite drug repurposing and clinical decision support, yet the upstream ontologies they depend on update on independent cycles that add millions of edges and deprecate hundreds of thousands more between releases. Yet existing continual graph learning has been studied almost exclusively on synthetic random splits of static, generic KGs, a regime that cannot reproduce the asynchronous, structured evolution real biomedical KGs undergo. To this end, we introduce Prime...

88. Analyzing Quality-Latency-Resource Trade-offs in a Technical Documentation RAG Assistant Using LoRA Adaptation

We study quality-latency-resource trade-offs in a documentation-grounded retrieval-augmented generation (RAG) system that uses Low-Rank Adaptation (LoRA) of the generator. We build a manually verified benchmark of 5,144 question-answer pairs over the official Kubernetes documentation and combine it with a fixed hybrid-retrieval pipeline (BGE-M3 dense, BGE-M3 native sparse, Reciprocal Rank Fusion, cross-encoder reranking). Over this benchmark we ablate 20 LoRA configurations on Llama-3.2-3B-Instr...

89. UnWeaving the knots of GraphRAG -- turns out VectorRAG is almost enough

One of the key problems in Retrieval-augmented generation (RAG) systems is that chunk-based retrieval pipelines represent the source chunks as atomic objects, mixing the information contained within such a chunk into a single vector. These vector representations are then fundamentally treated as isolated, independent and self-sufficient, with no attempt to represent possible relations between them. Such an approach has no dedicated mechanisms for handling multi-hop questions. Graph-based RAG sys...

90. STEM: Structure-Tracing Evidence Mining for Knowledge Graphs-Driven Retrieval-Augmented Generation

Knowledge Graph-based Question Answering (KGQA) plays a pivotal role in complex reasoning tasks but remains constrained by two persistent challenges: the structural heterogeneity of Knowledge Graphs(KGs) often leads to semantic mismatch during retrieval, while existing reasoning path retrieval methods lack a global structural perspective. To address these issues, we propose Structure-Tracing Evidence Mining (STEM), a novel framework that reframes multi-hop reasoning as a schema-guided graph sear...

91. RAGA: Reading-And-Graph-building-Agent for Autonomous Knowledge Graph Construction and Retrieval-Augmented Generation

Existing LLM-driven knowledge graph (KG) construction methods predominantly employ stateless batch processing pipelines, exhibiting structural deficiencies in cross-chunk semantic relation capture, entity disambiguation, and construction process interpretability. These limitations undermine KG quality, retrieval precision, and deployment trust in high-stakes domains. We propose RAGA (Reading And Graph-building Agent), an LLM-based autonomous KG construction and retrieval fusion framework. RAGA...

92. GROUNDEDKG-RAG: Grounded Knowledge Graph Index for Long-document Question Answering

Retrieval-augmented generation (RAG) systems have been widely adopted in contemporary large language models (LLMs) due to their ability to improve generation quality while reducing the required input context length. In this work, we focus on RAG systems for long-document question answering. Current approaches suffer from a heavy reliance on LLM descriptions resulting in high resource consumption and latency, repetitive content across hierarchical levels, and hallucinations due to no or limited g...

93. FastInsight: Fast and Insightful Retrieval via Fusion Operators for Graph RAG

Existing Graph RAG methods aiming for insightful retrieval on corpus graphs typically rely on time-intensive processes that interleave Large Language Model (LLM) reasoning. To enable time-efficient insightful retrieval, we propose FastInsight. We first introduce a graph retrieval taxonomy that categorizes existing methods into three fundamental operations: vector search, graph search, and model-based search. Through this taxonomy, we identify two critical limitations in current approaches: the t...

94. Integrating Graphs, Large Language Models, and Agents: Reasoning and Retrieval

Generative AI, particularly Large Language Models, increasingly integrates graph-based representations to enhance reasoning, retrieval, and structured decision-making. Despite rapid advances, there remains limited clarity regarding when, why, where, and what types of graph-LLM integrations are most appropriate across applications. This survey provides a concise, structured overview of the design choices underlying the integration of graphs with LLMs. We categorize existing methods based on their...

95. Bounded Path Context: A Controlled Study of Visible Path History in LLM-Based Knowledge Graph Question Answering

LLM-based knowledge-graph question answering (KGQA) delegates graph traversal to language models, turning each question into a sequence of local relation-selection decisions repeated across beams and hops. A common but untested default is to serialize the complete partial path into every routing prompt, even though the controller already maintains this path as exact symbolic state. Bounded Path Context (BPC) decouples these two roles: the controller retains full paths in symbolic memory for answ...

96. MicroWorld: Empowering Multimodal Large Language Models to Bridge the Microscopic Domain Gap with Multimodal Attribute Graph

Multimodal large language models (MLLMs) show remarkable potential for scientific reasoning, yet their performance in specialized domains such as microscopy remains limited by the scarcity of domain-specific training data and the difficulty of encoding fine-grained expert knowledge into model parameters. To bridge the gap, we introduce MicroWorld, a framework that constructs a multimodal attributed property graph (MAPG) from large-scale scientific image--caption corpora and leverages it to augme...

97. Text-Graph Synergy: A Bidirectional Verification and Completion Framework for RAG

Retrieval-Augmented Generation (RAG) has become a core paradigm for enhancing factual grounding and multi-hop reasoning in Large Language Models (LLMs). Traditional text-based RAG often retrieves logically irrelevant pseudo-evidence, while graph-based RAG is frequently hindered by search-time pruning, which may discard potentially valid reasoning paths. Existing hybrid approaches primarily adopt simple evidence concatenation or unidirectional enhancement, which fails to address the fundamental "...

98. SciNets: Graph-Constrained Multi-Hop Reasoning for Scientific Literature Synthesis

Cross-domain scientific synthesis requires connecting mechanistic explanations across fragmented literature, a capability that remains challenging for both retrieval-based systems and unconstrained language models. While recent work has applied large language models to scientific summarization and question answering, these approaches provide limited control over reasoning depth and structural grounding. We frame mechanistic synthesis as a graph-constrained multi-hop reasoning problem over litera...

99. Reliable Graph-RAG for Codebases: AST-Derived Graphs vs LLM-Extracted Knowledge Graphs

Retrieval-Augmented Generation for software engineering often relies on vector similarity search, which captures topical similarity but can fail on multi-hop architectural reasoning such as controller to service to repository chains, interface-driven wiring, and inheritance. This paper benchmarks three retrieval pipelines on Java codebases (Shopizer, with additional runs on ThingsBoard and OpenMRS Core): (A) vector-only No-Graph RAG, (B) an LLM-generated knowledge graph RAG (LLM-KB), and (C) a d...

Graph-based Retrieval-Augmented Generation (GraphRAG) advances flat document retrieval by structuring knowledge as relational graphs, enabling more coherent and effective reasoning. However, applying it to specific domains like legal reasoning faces critical challenges. (i) Legal corpora are heterogeneous, containing multi-granular knowledge from cases, articles and interpretations. A flat knowledge graph cannot adequately differentiate between factual details, applied rules, and abstract princi...